EDIT: As of Mar. 31, 2012, this is now complete! Thanks to everyone who contributed!
Status: COMPLETE!
Mario Mania
Super Mario All-Stars (https://www.vgmaps.com/Atlas/SuperNES/index.htm#SuperMarioAllStars)
Super Mario World (https://www.vgmaps.com/Atlas/SuperNES/index.htm#SuperMarioWorld)
Super Mario World 2: Yoshi's Island (https://www.vgmaps.com/Atlas/SuperNES/index.htm#SuperMarioWorld2YoshisIsland)
+Super Mario RPG: Legend Of The Seven Stars (https://www.vgmaps.com/Atlas/SuperNES/index.htm#SuperMarioRPGLegendOfTheSevenStars)
+Mario & Wario (J) (https://www.vgmaps.com/Atlas/SuperNES/index.htm#MarioWario)
+Super Mario Kart (https://www.vgmaps.com/Atlas/SuperNES/index.htm#SuperMarioKart)
+Yoshi's Safari (https://www.vgmaps.com/Atlas/SuperNES/index.htm#YoshisSafari)
Amazing Zelda
The Legend Of Zelda: A Link To The Past (https://www.vgmaps.com/Atlas/SuperNES/index.htm#LegendOfZeldaALinkToThePast)
+BS Zelda (J) (https://www.vgmaps.com/Atlas/SuperNES/index.htm#BSZelda)
Mega Mechanical Mayhem
Mega Man VII (https://www.vgmaps.com/Atlas/SuperNES/index.htm#MegaManVII)
Mega Man & Bass (J) (https://www.vgmaps.com/Atlas/SuperNES/index.htm#MegaManBass)
+Mega Man's Soccer (https://www.vgmaps.com/Atlas/SuperNES/index.htm#MegaMansSoccer)
+Mega Man X (https://www.vgmaps.com/Atlas/SuperNES/index.htm#MegaManX)
+Mega Man X 2 (https://www.vgmaps.com/Atlas/SuperNES/index.htm#MegaManX2)
+Mega Man X 3 (https://www.vgmaps.com/Atlas/SuperNES/index.htm#MegaManX3)
Disney Dizziness
The Magical Quest: Starring Mickey Mouse (https://www.vgmaps.com/Atlas/SuperNES/index.htm#MagicalQuestStarringMickeyMouse)
The Great Circus Mystery: Starring Mickey & Minnie (https://www.vgmaps.com/Atlas/SuperNES/index.htm#GreatCircusMysteryStarringMickeyMinnie)
The Magical Quest 3: Starring Mickey & Donald (J) (https://www.vgmaps.com/Atlas/SuperNES/index.htm#MagicalQuest3StarringMickeyDonald)
Goof Troop (https://www.vgmaps.com/Atlas/SuperNES/index.htm#GoofTroop)
Aladdin (https://www.vgmaps.com/Atlas/SuperNES/index.htm#Aladdin)
Bonkers (https://www.vgmaps.com/Atlas/SuperNES/index.htm#Bonkers)
Ninja Magic
Ninja Gaiden Trilogy (https://www.vgmaps.com/Atlas/SuperNES/index.htm#NinjaGaidenTrilogy)
Turtles In Trouble
Teenage Mutant Ninja Turtles IV: Turtles In Time (https://www.vgmaps.com/Atlas/SuperNES/index.htm#TeenageMutantNinjaTurtlesIVTurtlesInTime)
+Teenage Mutant Ninja Turtles: Tournament Fighters (https://www.vgmaps.com/Atlas/SuperNES/index.htm#TeenageMutantNinjaTurtlesTournamentFighters)
Castles Of Horror
Super Castlevania IV (https://www.vgmaps.com/Atlas/SuperNES/index.htm#SuperCastlevaniaIV)
Castlevania: Dracula X (https://www.vgmaps.com/Atlas/SuperNES/index.htm#CastlevaniaDraculaX)