Comparing with A Link To The Past is interesting. They got the overall layout right. The interesting thing is that they squashed Death Mountain to about half its size. That would leave room in the northeast for Zora's Domain (which is where it is implied to be in the Super NES original, after all). The gap just southwest of it (just northeast of Hyrule Castle), is where the graveyard would be, and its omission bothers me...
Now that I read the page again, it says that the map has actually "been cleaned up some", and that the graveyard was indeed there, as seen in pre-release screenshots, but not in the files.